MMGT1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MMGT1 mutation is significantly associated with the RNA expression of many other genes, with 1,842 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MMGT1-associated genes across cancer lineages are RNU1-17P, RNU1-62P, and LINC00459. Each is linked with MMGT1 in more than 2 cancer types. Because this analysis shows association rather than direction, both MMGT1-to-partner and partner-to-MMGT1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU1-17P grouped by MMGT1-low versus MMGT1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MMGT1→partner) and Y-score (partner→MMGT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNU1-17P →+0.149+1.997.001.00533
CESCRNU1-62P →+0.304+6.124<.001<.00132
CESCLINC00459 →+0.075+4.669<.001.00732
LUADRNU6-1040P →+0.497+7.930<.001.00832
COADRNU6-1175P →+0.977+5.693<.001.00332
COADRNU2-34P →+0.857+6.721<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,842 associations by consensus.

RNU1-17P by MMGT1 expression — UCEC

Box plot of RNU1-17P in MMGT1-low vs MMGT1-high samples in UCEC.

Explore this box plot interactively →

Exploration