MLNR

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MLNR mutation is significantly associated with the total protein of many other genes, with 9 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MLNR-associated genes across cancer lineages are Fibronectin, MSH2, and p62 Lck ligand. Each is linked with MLNR in more than 1 cancer types. Because this analysis shows association rather than direction, both MLNR-to-partner and partner-to-MLNR results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Fibronectin grouped by MLNR-low versus MLNR-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MLNR→partner) and Y-score (partner→MLNR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECFibronectin →-0.355-2.990.026.03631
UCECMSH2 →-0.317-3.143.004.01831
UCECp62 Lck ligand →+0.404+2.459.010.02031
UCECPI3K-p110-a →-0.234-2.459.006.02031
UCECBRCA2 →-0.168-3.577.006.00231
UCECCD49b →-0.313-2.986.022.03531
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

Fibronectin by MLNR expression — UCEC

Box plot of Fibronectin in MLNR-low vs MLNR-high samples in UCEC.

Explore this box plot interactively →

Exploration