MIR6859-3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MIR6859-3 mutation is significantly associated with the RNA expression of many other genes, with 28 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MIR6859-3-associated genes across cancer lineages are MIR1266, RNU6-380P, and VCY1B. Each is linked with MIR6859-3 in more than 1 cancer types. Because this analysis shows association rather than direction, both MIR6859-3-to-partner and partner-to-MIR6859-3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR1266 grouped by MIR6859-3-low versus MIR6859-3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MIR6859-3→partner) and Y-score (partner→MIR6859-3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMIR1266 →+0.399+4.771<.001<.00132
UCECRNU6-380P →+0.350+5.470<.001.00132
BRCAVCY1B →+0.073+7.731<.001.00931
BRCADEFT1P →+1.097+8.055<.001.00731
BRCARN7SKP33 →+0.119+7.731<.001.00931
BRCARN7SL400P →+0.514+9.057<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 28 associations by consensus.

MIR1266 by MIR6859-3 expression — UCEC

Box plot of MIR1266 in MIR6859-3-low vs MIR6859-3-high samples in UCEC.

Explore this box plot interactively →

Exploration