MIR548S

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MIR548S RNA expression is significantly associated with the go_rna of many other GO terms, with 5,721 significant associations in total. STAD shows the largest number of these associations.

The most reproducible MIR548S-associated GO terms across cancer lineages are Negative regulation of mRNA metabolic process, Glycerophospholipid metabolic process, and Peptidyl-lysine modification. Each is linked with MIR548S in more than 11 cancer types. Because this analysis shows association rather than direction, both MIR548S-to-partner and partner-to-MIR548S results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of mRNA metabolic process grouped by MIR548S-low versus MIR548S-high in LUSC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (MIR548S→partner) and Y-score (partner→MIR548S) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUSCNegative regulation of mRNA metabolic process →+0.039+0.095<.001<.001312
STADGlycerophospholipid metabolic process →+0.030+0.258<.001<.001312
LUSCPeptidyl-lysine modification →+0.042+0.089<.001.003311
LUSCRegulation of telomere maintenance via telomere lengthening →+0.045+0.112<.001<.001311
STADRegulation of ubiquitin-dependent protein catabolic process →+0.042+0.340<.001<.001311
LUSCNuclear-transcribed mRNA catabolic process, deadenylation-dependent decay →+0.048+0.069<.001<.001311
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,721 associations by consensus.

Negative regulation of mRNA metabolic process by MIR548S expression — LUSC

Box plot of Negative regulation of mRNA metabolic process in MIR548S-low vs MIR548S-high samples in LUSC.

Explore this box plot interactively →

Exploration