MIR548AT

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MIR548AT RNA expression is significantly associated with the go_rna of many other GO terms, with 6,889 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible MIR548AT-associated GO terms across cancer lineages are Lysosomal transport, Cytosolic transport, and Microtubule anchoring. Each is linked with MIR548AT in more than 27 cancer types. Because this analysis shows association rather than direction, both MIR548AT-to-partner and partner-to-MIR548AT results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Lysosomal transport grouped by MIR548AT-low versus MIR548AT-high in DLBC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (MIR548AT→partner) and Y-score (partner→MIR548AT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
DLBCLysosomal transport →+0.075+0.601<.001.001228
STADCytosolic transport →+0.040+0.603<.001<.001326
DLBCMicrotubule anchoring →+0.061+0.492<.001<.001326
DLBCRetrograde transport, endosome to Golgi →+0.067+0.370.001.002326
DLBCPost-Golgi vesicle-mediated transport →+0.085+0.622<.001<.001326
DLBCRegulation of mRNA splicing, via spliceosome →+0.070+0.385<.001.001325
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,889 associations by consensus.

Lysosomal transport by MIR548AT expression — DLBC

Box plot of Lysosomal transport in MIR548AT-low vs MIR548AT-high samples in DLBC.

Explore this box plot interactively →

Exploration