MIR498

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MIR498 mutation is significantly associated with the RNA expression of many other genes, with 8 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible MIR498-associated genes across cancer lineages are MIR6827, NIFKP7, and MIR4769. Each is linked with MIR498 in more than 1 cancer types. Because this analysis shows association rather than direction, both MIR498-to-partner and partner-to-MIR498 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MIR498→partner) and Y-score (partner→MIR498) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMMIR6827 →+0.614+5.362<.001.00531
SKCMNIFKP7 →+0.060+5.159<.001.00731
SKCMMIR4769 →+0.700+6.199<.001.00131
SKCMOR1E3 →+0.058+6.328<.001.00131
SKCMRNVU1-18 →+0.276+5.159<.001.00731
SKCMRNA5SP492 →+0.503+5.037<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 8 associations by consensus.

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