MIR4654

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MIR4654 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,735 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible MIR4654-associated proteins across cancer lineages are C1orf226_S223, C1orf226_S198, and SRSF7. Each is linked with MIR4654 in more than 6 cancer types. Because this analysis shows association rather than direction, both MIR4654-to-partner and partner-to-MIR4654 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, MIR4654 versus C1orf226_S223 in HNSC, with a Pearson correlation of 0.43.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (MIR4654→partner) and Y-score (partner→MIR4654) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCC1orf226_S223 →+0.654+1.447<.001<.00137
LUADC1orf226_S198 →+1.286+1.132<.001<.00136
GBMSRSF7 →+0.203+0.805.008<.00135
HNSCWIZ →+0.235+1.327.005.00125
LSCCPRPF3 →+0.254+0.814<.001<.00134
LSCCRBBP5 →+0.297+1.192<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,735 associations by consensus.

MIR4654 vs C1orf226_S223 — HNSC

Per-sample scatter of MIR4654 vs C1orf226_S223 in HNSC (Pearson r = 0.43).

Explore this scatter interactively →

Exploration