MIR4489

Across TCGA patient cohorts, MIR4489 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,061 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible MIR4489-associated GO terms across cancer lineages are High-density lipoprotein particle assembly, Positive regulation of DNA repair, and Positive regulation of double-strand break repair. Each is linked with MIR4489 in more than 23 cancer types. Because this analysis shows association rather than direction, both MIR4489-to-partner and partner-to-MIR4489 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, High-density lipoprotein particle assembly grouped by MIR4489-low versus MIR4489-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (MIR4489→partner) and Y-score (partner→MIR4489) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	High-density lipoprotein particle assembly →	+0.081	+0.709	<.001	<.001	3	24
KIRC	Positive regulation of DNA repair →	+0.039	+1.238	<.001	<.001	3	23
ESCA	Positive regulation of double-strand break repair →	+0.059	+0.855	.002	<.001	3	22
KIRC	Regulation of DNA strand elongation →	+0.047	+1.121	<.001	<.001	3	22
KIRC	Protein peptidyl-prolyl isomerization →	+0.061	+1.146	<.001	<.001	3	22
ESCA	Macromolecule deacylation →	+0.060	+0.793	.001	<.001	3	21

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,061 associations by consensus.

High-density lipoprotein particle assembly by MIR4489 expression — ESCA

Explore this box plot interactively →