MIR3938

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MIR3938 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,302 significant associations in total. GBM shows the largest number of these associations.

The most reproducible MIR3938-associated proteins across cancer lineages are MAP1B_S1965, SNX33, and ITPRID2_S92. Each is linked with MIR3938 in more than 2 cancer types. Because this analysis shows association rather than direction, both MIR3938-to-partner and partner-to-MIR3938 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, MIR3938 versus MAP1B_S1965 in LSCC, with a Pearson correlation of 0.28.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (MIR3938→partner) and Y-score (partner→MIR3938) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCMAP1B_S1965 →+0.743+0.738.005.00233
GBMSNX33 →-0.264-0.908<.001<.00133
GBMITPRID2_S92 →-0.519-0.988<.001.00133
GBMTES_S168 →-0.416-1.003.005<.00133
GBMRIMS3_S22 →+0.932+0.700<.001.00232
UCECSCFD1 →-0.172-0.802<.001.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,302 associations by consensus.

MIR3938 vs MAP1B_S1965 — LSCC

Per-sample scatter of MIR3938 vs MAP1B_S1965 in LSCC (Pearson r = 0.28).

Explore this scatter interactively →

Exploration