MIR3907

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MIR3907 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,082 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible MIR3907-associated proteins across cancer lineages are AFAP1_S548, MYO9B_S1290, and ASAP3_S862. Each is linked with MIR3907 in more than 3 cancer types. Because this analysis shows association rather than direction, both MIR3907-to-partner and partner-to-MIR3907 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, MIR3907 versus AFAP1_S548 in BRCA, with a Pearson correlation of 0.23.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (MIR3907→partner) and Y-score (partner→MIR3907) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAAFAP1_S548 →+0.485+0.303.004.00634
PDACMYO9B_S1290 →+0.547+0.694.001<.00134
BRCAASAP3_S862 →+0.648+0.427<.001<.00134
OVCILP →+1.048+0.782<.001.00434
LSCCMRC2 →+0.629+0.821<.001<.00134
LSCCARMC9 →+0.309+0.576<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,082 associations by consensus.

MIR3907 vs AFAP1_S548 — BRCA

Per-sample scatter of MIR3907 vs AFAP1_S548 in BRCA (Pearson r = 0.23).

Explore this scatter interactively →

Exploration