MGAM

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MGAM mutation is significantly associated with the total protein of many other genes, with 86 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MGAM-associated genes across cancer lineages are Src, ASNS, and FOXO3a_pS318_S321. Each is linked with MGAM in more than 4 cancer types. Because this analysis shows association rather than direction, both MGAM-to-partner and partner-to-MGAM results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Src grouped by MGAM-low versus MGAM-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MGAM→partner) and Y-score (partner→MGAM) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADSrc →-0.161-1.354.009.03535
COADASNS →+0.526+2.000<.001.00734
LUADFOXO3a_pS318_S321 →-0.092-2.305.005.00433
BRCAJNK_pT183_Y185 →-0.273-2.321.015.03733
BRCAp27_pT198 →+0.151+3.459.049.00633
BRCAS6_pS240_S244 →+0.498+2.817.014.03724
Each partner links to its Q-omics profile. Showing the 6 strongest of 86 associations by consensus.

Src by MGAM expression — COAD

Box plot of Src in MGAM-low vs MGAM-high samples in COAD.

Explore this box plot interactively →

Exploration