MEIS2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MEIS2 mutation is significantly associated with the RNA expression of many other genes, with 5,430 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MEIS2-associated genes across cancer lineages are CENPM, MCM5, and MED31. Each is linked with MEIS2 in more than 3 cancer types. Because this analysis shows association rather than direction, both MEIS2-to-partner and partner-to-MEIS2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CENPM grouped by MEIS2-low versus MEIS2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MEIS2→partner) and Y-score (partner→MEIS2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCENPM →+0.628+1.784<.001<.00133
UCECMCM5 →+0.479+2.828<.001.00133
UCECMED31 →+0.454+2.269<.001<.00133
UCECPDHX →+0.557+2.301<.001<.00133
UCECHAUS8 →+0.400+2.000<.001<.00133
UCECLDHA →+0.549+2.000<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,430 associations by consensus.

CENPM by MEIS2 expression — UCEC

Box plot of CENPM in MEIS2-low vs MEIS2-high samples in UCEC.

Explore this box plot interactively →

Exploration