MED15

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MED15 mutation is significantly associated with the RNA expression of many other genes, with 2,425 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MED15-associated genes across cancer lineages are IFNA11P, RNU6-626P, and RNA5SP198. Each is linked with MED15 in more than 1 cancer types. Because this analysis shows association rather than direction, both MED15-to-partner and partner-to-MED15 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, IFNA11P grouped by MED15-low versus MED15-high in BRCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MED15→partner) and Y-score (partner→MED15) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAIFNA11P →+0.135+4.195.008.00132
CESCRNU6-626P →+0.534+5.669<.001.00332
CESCRNA5SP198 →+0.374+6.144<.001.00132
BRCARNU6-933P →+0.399+3.369<.001.00432
SKCMATG7 →+0.385+3.247.009.00832
SKCMRNA5SP213 →+0.104+4.488<.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,425 associations by consensus.

IFNA11P by MED15 expression — BRCA

Box plot of IFNA11P in MED15-low vs MED15-high samples in BRCA.

Explore this box plot interactively →

Exploration