MCOLN2

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MCOLN2 mutation is significantly associated with the total protein of many other genes, with 38 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MCOLN2-associated genes across cancer lineages are ASNS, Caspase-7-cleavedD198, and G6PD. Each is linked with MCOLN2 in more than 2 cancer types. Because this analysis shows association rather than direction, both MCOLN2-to-partner and partner-to-MCOLN2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ASNS grouped by MCOLN2-low versus MCOLN2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MCOLN2→partner) and Y-score (partner→MCOLN2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECASNS →+0.397+1.874.005.04933
UCECCaspase-7-cleavedD198 →+0.617+2.604.008.00533
SKCMG6PD →+0.208+2.584.032.01131
SKCMp90 RSK →+0.216+2.584.026.01131
UCEC14-3-3_beta →-0.086-1.847.030.04931
UCECEGFR_pY1068 →-0.199-1.584.043.03631
Each partner links to its Q-omics profile. Showing the 6 strongest of 38 associations by consensus.

ASNS by MCOLN2 expression — UCEC

Box plot of ASNS in MCOLN2-low vs MCOLN2-high samples in UCEC.

Explore this box plot interactively →

Exploration