MAPRE2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MAPRE2 mutation is significantly associated with the RNA expression of many other genes, with 1,057 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MAPRE2-associated genes across cancer lineages are LCN1P2, RNU6-1086P, and RPL21P112. Each is linked with MAPRE2 in more than 1 cancer types. Because this analysis shows association rather than direction, both MAPRE2-to-partner and partner-to-MAPRE2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LCN1P2 grouped by MAPRE2-low versus MAPRE2-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MAPRE2→partner) and Y-score (partner→MAPRE2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADLCN1P2 →+0.195+4.707.003<.00132
HNSCRNU6-1086P →+0.416+6.468<.001.00132
LUSCRPL21P112 →+0.156+3.578<.001.00432
LUSCRN7SL189P →+0.110+3.832.008.00432
LUSCMIR3115 →+0.515+4.196<.001.00132
LUSCMIR6803 →+0.218+4.733.001.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,057 associations by consensus.

LCN1P2 by MAPRE2 expression — COAD

Box plot of LCN1P2 in MAPRE2-low vs MAPRE2-high samples in COAD.

Explore this box plot interactively →

Exploration