MAP3K4

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MAP3K4 mutation is significantly associated with the RNA expression of many other genes, with 5,568 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MAP3K4-associated genes across cancer lineages are GRSF1, ALDH18A1, and MAPK8. Each is linked with MAP3K4 in more than 4 cancer types. Because this analysis shows association rather than direction, both MAP3K4-to-partner and partner-to-MAP3K4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GRSF1 grouped by MAP3K4-low versus MAP3K4-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MAP3K4→partner) and Y-score (partner→MAP3K4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMGRSF1 →+0.510+2.613.001.00535
UCECALDH18A1 →+0.303+1.354.007.00135
COADMAPK8 →+0.391+2.372<.001.00234
COADP4HA1 →+0.756+3.937<.001<.00134
COADPAQR3 →+0.414+2.500<.001.00934
COADNANP →+0.398+3.362.005.00434
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,568 associations by consensus.

GRSF1 by MAP3K4 expression — SKCM

Box plot of GRSF1 in MAP3K4-low vs MAP3K4-high samples in SKCM.

Explore this box plot interactively →

Exploration