MAP1LC3B

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MAP1LC3B protein abundance is significantly associated with the RNA expression of many other genes, with 7,461 significant associations in total. GBM shows the largest number of these associations.

The most reproducible MAP1LC3B-associated genes across cancer lineages are FMC1, MIR17HG, and ZNF3. Each is linked with MAP1LC3B in more than 3 cancer types. Because this analysis shows association rather than direction, both MAP1LC3B-to-partner and partner-to-MAP1LC3B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, MAP1LC3B versus FMC1 in CCRCC, with a Pearson correlation of 0.82.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MAP1LC3B→partner) and Y-score (partner→MAP1LC3B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCFMC1 →+0.652+0.385.002.00734
UCECMIR17HG →+1.069+0.721.006.00133
LSCCZNF3 →+0.502+0.569<.001<.00133
LUADZSCAN21 →+0.513+0.426<.001<.00133
BRCAZNF284 →+0.427+0.421<.001.00333
BRCADOCK11 →-0.670-0.363.001.00433
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,461 associations by consensus.

MAP1LC3B vs FMC1 — CCRCC

Per-sample scatter of MAP1LC3B vs FMC1 in CCRCC (Pearson r = 0.82).

Explore this scatter interactively →

Exploration