MAP1LC3A

Across TCGA cell cohorts, MAP1LC3A mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible MAP1LC3A-associated genes across cancer lineages are OR2M5 and MINDY4B. Each is linked with MAP1LC3A in more than 1 cancer types. Because this analysis shows association rather than direction, both MAP1LC3A-to-partner and partner-to-MAP1LC3A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR2M5 grouped by MAP1LC3A-low versus MAP1LC3A-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MAP1LC3A→partner) and Y-score (partner→MAP1LC3A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LARGE_INTESTINE	OR2M5 →	+0.022	+5.415	<.001	.004	3	1
LARGE_INTESTINE	MINDY4B →	+0.036	+5.415	<.001	.004	3	1

Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

OR2M5 by MAP1LC3A expression — LARGE_INTESTINE

Explore this box plot interactively →