MAGI1-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, MAGI1-AS1 RNA differs between tumor and matched normal tissue in 6 of 18 cancer types tested, making tumor–normal expression one of MAGI1-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in kidney chromophobe (KICH), where MAGI1-AS1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types MAGI1-AS1 is over-expressed in tumor, although a few such as KIRC and BRCA show the opposite, repressed pattern.

KICH, KIRC, and STAD are the cancer types where MAGI1-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in MAGI1-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KICHAllAll+0.360.0015view →
KIRCAllII,III,IV−0.037.0055view →
STADAllAll+0.218.0122view →
BRCAAllIII,IV−0.153.0012view →
CHOLAllAll+0.115.0091view →
LUADFemaleII,III,IV−0.060.0331view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 6 strongest of 6 lineages.

MAGI1-AS1–KICH

Tumor-vs-normal expression box plot for MAGI1-AS1 RNA in KICH.

Open the KICH breakdown →

Exploration