LYSMD1

Across TCGA patient cohorts, LYSMD1 RNA expression is significantly associated with the protein abundance of many other proteins, with 19,835 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LYSMD1-associated proteins across cancer lineages are RPRD2, CDC73, and CHAMP1. Each is linked with LYSMD1 in more than 8 cancer types. Because this analysis shows association rather than direction, both LYSMD1-to-partner and partner-to-LYSMD1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LYSMD1 versus RPRD2 in LSCC, with a Pearson correlation of 0.75.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LYSMD1→partner) and Y-score (partner→LYSMD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	RPRD2 →	+0.349	+0.780	<.001	<.001	3	9
BRCA	CDC73 →	+0.279	+0.637	<.001	<.001	3	8
GBM	CHAMP1 →	+0.323	+0.324	<.001	<.001	3	8
BRCA	GATAD2B →	+0.383	+0.643	<.001	<.001	3	8
HNSC	OTUD7B →	+0.374	+0.860	<.001	<.001	3	8
OV	FUS →	+0.488	+0.510	.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 19,835 associations by consensus.

LYSMD1 vs RPRD2 — LSCC

Explore this scatter interactively →