LYSMD1

Across TCGA patient cohorts, LYSMD1 protein abundance is significantly associated with the RNA expression of many other genes, with 11,681 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LYSMD1-associated genes across cancer lineages are UBE2Q1, MTPAP, and DSTYK. Each is linked with LYSMD1 in more than 4 cancer types. Because this analysis shows association rather than direction, both LYSMD1-to-partner and partner-to-LYSMD1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LYSMD1 versus UBE2Q1 in UCEC, with a Pearson correlation of 0.37.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LYSMD1→partner) and Y-score (partner→LYSMD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	UBE2Q1 →	+0.588	+0.358	<.001	<.001	3	5
LSCC	MTPAP →	+0.550	+0.373	<.001	<.001	3	4
UCEC	DSTYK →	+0.398	+0.317	<.001	.002	3	4
LSCC	POGK →	+0.543	+0.304	<.001	<.001	3	4
LSCC	SNX27 →	+0.621	+0.473	<.001	<.001	3	4
LSCC	GOLPH3L →	+0.701	+0.355	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,681 associations by consensus.

LYSMD1 vs UBE2Q1 — UCEC

Explore this scatter interactively →