LYSMD1

Across TCGA cell cohorts, LYSMD1 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,392 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible LYSMD1-associated GO terms across cancer lineages are Vesicle budding from membrane, Detoxification of copper ion, and Stress response to copper ion. Each is linked with LYSMD1 in more than 10 cancer types. Because this analysis shows association rather than direction, both LYSMD1-to-partner and partner-to-LYSMD1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Vesicle budding from membrane grouped by LYSMD1-low versus LYSMD1-high in PANCREAS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LYSMD1→partner) and Y-score (partner→LYSMD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PANCREAS	Vesicle budding from membrane →	+0.077	+0.779	<.001	<.001	3	11
BONE	Detoxification of copper ion →	-0.377	-0.493	<.001	.001	3	10
BONE	Stress response to copper ion →	-0.377	-0.493	<.001	.001	3	10
SOFT_TISSUE	Regulation of homotypic cell-cell adhesion →	-0.181	-0.945	<.001	<.001	3	10
OESOPHAGUS	Protein modification by small protein removal →	+0.068	+1.024	<.001	.002	3	10
URINARY_TRACT	Protein targeting to Golgi apparatus →	+0.151	+0.951	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,392 associations by consensus.

Vesicle budding from membrane by LYSMD1 expression — PANCREAS

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