LYPLA2P1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LYPLA2P1 mutation is significantly associated with the RNA expression of many other genes, with 93 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible LYPLA2P1-associated genes across cancer lineages are NCAPGP2, TUBB4BP1, and GCSHP2. Each is linked with LYPLA2P1 in more than 1 cancer types. Because this analysis shows association rather than direction, both LYPLA2P1-to-partner and partner-to-LYPLA2P1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LYPLA2P1→partner) and Y-score (partner→LYPLA2P1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCANCAPGP2 →+0.156+4.883<.001.00232
COADTUBB4BP1 →+0.280+4.917<.001.00332
COADGCSHP2 →+0.127+4.392<.001.00632
BLCAGRPEL2P3 →+0.071+5.444<.001.00232
BLCAUSP12PY →+0.066+4.685<.001.00732
BLCARNU7-74P →+0.758+6.307<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 93 associations by consensus.

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