LY6G6E

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LY6G6E RNA expression is significantly associated with the protein abundance of many other proteins, with 9,148 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LY6G6E-associated proteins across cancer lineages are SEC24A, GGH, and ZNF318. Each is linked with LY6G6E in more than 3 cancer types. Because this analysis shows association rather than direction, both LY6G6E-to-partner and partner-to-LY6G6E results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LY6G6E versus SEC24A in LSCC, with a Pearson correlation of -0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LY6G6E→partner) and Y-score (partner→LY6G6E) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCSEC24A →-0.297-0.328<.001<.00134
UCECGGH →+0.927+0.654<.001.00134
LSCCZNF318 →+0.456+0.424<.001<.00134
LSCCZNF318_S2101 →+0.547+0.251<.001<.00134
BRCASCML2_S511 →+0.933+0.038<.001.00234
LSCCTWF2 →-0.238-0.328<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,148 associations by consensus.

LY6G6E vs SEC24A — LSCC

Per-sample scatter of LY6G6E vs SEC24A in LSCC (Pearson r = -0.36).

Explore this scatter interactively →

Exploration