LY6D

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LY6D RNA expression is significantly associated with the protein abundance of many other proteins, with 10,834 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible LY6D-associated proteins across cancer lineages are FSCN1, TRIM29, and TRIM29_S21. Each is linked with LY6D in more than 5 cancer types. Because this analysis shows association rather than direction, both LY6D-to-partner and partner-to-LY6D results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LY6D versus FSCN1 in BRCA, with a Pearson correlation of 0.33.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LY6D→partner) and Y-score (partner→LY6D) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAFSCN1 →+0.586+1.593<.001.00126
UCECTRIM29 →+1.237+1.459<.001<.00135
LSCCTRIM29_S21 →+1.413+3.017<.001<.00135
BRCATRIM29_S489 →+1.308+1.569<.001<.00135
PDACZNF185 →+0.675+3.021<.001<.00135
LSCCS100A14 →+1.129+2.654<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,834 associations by consensus.

LY6D vs FSCN1 — BRCA

Per-sample scatter of LY6D vs FSCN1 in BRCA (Pearson r = 0.33).

Explore this scatter interactively →

Exploration