LVRN

Across TCGA cell cohorts, LVRN RNA expression is significantly associated with the go_rna of many other GO terms, with 2,377 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible LVRN-associated GO terms across cancer lineages are Regulation of intracellular transport, Endoplasmic reticulum to Golgi vesicle-mediated transport, and Golgi vesicle transport. Each is linked with LVRN in more than 7 cancer types. Because this analysis shows association rather than direction, both LVRN-to-partner and partner-to-LVRN results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of intracellular transport grouped by LVRN-low versus LVRN-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LVRN→partner) and Y-score (partner→LVRN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STOMACH	Regulation of intracellular transport →	+0.062	+0.867	.007	.007	2	8
STOMACH	Endoplasmic reticulum to Golgi vesicle-mediated transport →	+0.072	+0.866	<.001	.001	3	7
STOMACH	Golgi vesicle transport →	+0.089	+0.963	<.001	.002	3	7
BONE	Response to acid chemical →	+0.070	+0.244	<.001	<.001	3	6
BLOOD_Lymphoma	Negative regulation of metallopeptidase activity →	+0.667	+0.286	.009	.004	3	6
STOMACH	Vesicle cargo loading →	+0.105	+0.885	.006	.005	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,377 associations by consensus.

Regulation of intracellular transport by LVRN expression — STOMACH

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