LSP1P4

Across TCGA patient cohorts, LSP1P4 mutation is significantly associated with the RNA expression of many other genes, with 74 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LSP1P4-associated genes across cancer lineages are CCT3P1, FAM27B, and MIR1298. Each is linked with LSP1P4 in more than 1 cancer types. Because this analysis shows association rather than direction, both LSP1P4-to-partner and partner-to-LSP1P4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CCT3P1 grouped by LSP1P4-low versus LSP1P4-high in LUAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LSP1P4→partner) and Y-score (partner→LSP1P4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	CCT3P1 →	+0.058	+4.984	<.001	.005	3	2
UCEC	FAM27B →	+0.144	+4.453	<.001	.006	3	2
BLCA	MIR1298 →	+0.413	+7.640	<.001	.009	3	2
UCEC	RNU7-10P →	+0.776	+3.838	.002	.002	3	1
UCEC	MIR6870 →	+0.627	+3.759	<.001	.005	3	1
UCEC	MIR8071-1 →	+1.495	+3.799	.001	.005	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 74 associations by consensus.

CCT3P1 by LSP1P4 expression — LUAD

Explore this box plot interactively →