LSMEM1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LSMEM1 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,161 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible LSMEM1-associated GO terms across cancer lineages are Obsolete histone modification, Positive regulation of double-strand break repair, and Regulation of DNA recombination. Each is linked with LSMEM1 in more than 29 cancer types. Because this analysis shows association rather than direction, both LSMEM1-to-partner and partner-to-LSMEM1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LSMEM1→partner) and Y-score (partner→LSMEM1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SCLCObsolete histone modification →+0.083+0.991<.001<.001330
SCLCPositive regulation of double-strand break repair →+0.079+1.006<.001<.001330
SCLCRegulation of DNA recombination →+0.060+0.908<.001<.001329
SCLCRegulation of DNA-templated transcription initiation →+0.075+1.049<.001<.001329
SCLCProtein deacetylation →+0.069+0.811<.001<.001329
SCLCPositive regulation of double-strand break repair via homologous recombination →+0.111+1.253<.001<.001328
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,161 associations by consensus.

Exploration