LRRTM4-AS1

Across TCGA patient cohorts, LRRTM4-AS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,447 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LRRTM4-AS1-associated GO terms across cancer lineages are Transcription by RNA polymerase I, Recombinational repair, and Obsolete histone modification. Each is linked with LRRTM4-AS1 in more than 9 cancer types. Because this analysis shows association rather than direction, both LRRTM4-AS1-to-partner and partner-to-LRRTM4-AS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Transcription by RNA polymerase I grouped by LRRTM4-AS1-low versus LRRTM4-AS1-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LRRTM4-AS1→partner) and Y-score (partner→LRRTM4-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Transcription by RNA polymerase I →	+0.107	+0.098	<.001	<.001	3	10
STAD	Recombinational repair →	+0.089	+0.092	<.001	<.001	3	10
STAD	Obsolete histone modification →	+0.088	+0.085	<.001	<.001	3	10
STAD	Telomere organization →	+0.093	+0.085	<.001	<.001	3	10
STAD	Regulation of telomere maintenance via telomere lengthening →	+0.094	+0.076	<.001	<.001	3	9
ESCA	Embryonic skeletal system development →	+0.062	+0.074	<.001	.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,447 associations by consensus.

Transcription by RNA polymerase I by LRRTM4-AS1 expression — STAD

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