LRRTM2

Across TCGA patient cohorts, LRRTM2 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,386 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LRRTM2-associated proteins across cancer lineages are RCSD1_S68, AMPD3_S85, and WBP1L_S173. Each is linked with LRRTM2 in more than 4 cancer types. Because this analysis shows association rather than direction, both LRRTM2-to-partner and partner-to-LRRTM2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LRRTM2 versus RCSD1_S68 in PDAC, with a Pearson correlation of -0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LRRTM2→partner) and Y-score (partner→LRRTM2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PDAC	RCSD1_S68 →	-0.506	-0.340	<.001	.002	3	5
CCRCC	AMPD3_S85 →	-0.710	-1.058	.003	.004	3	5
PDAC	WBP1L_S173 →	-0.320	-0.371	.003	<.001	3	4
PDAC	MRTFB_S222 →	+0.972	+0.275	<.001	<.001	3	3
GBM	NF1 →	+0.293	+0.533	<.001	<.001	3	3
PDAC	ARPC1A →	+0.724	+0.352	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,386 associations by consensus.

LRRTM2 vs RCSD1_S68 — PDAC

Explore this scatter interactively →