LRPPRC

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LRPPRC protein abundance is significantly associated with the RNA expression of many other genes, with 20,966 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LRPPRC-associated genes across cancer lineages are DCN, MT-CO3, and IFFO1. Each is linked with LRPPRC in more than 8 cancer types. Because this analysis shows association rather than direction, both LRPPRC-to-partner and partner-to-LRPPRC results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LRPPRC versus DCN in OV, with a Pearson correlation of -0.43.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LRPPRC→partner) and Y-score (partner→LRPPRC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVDCN →-1.309-0.289<.001<.00139
HNSCMT-CO3 →+0.814+0.380<.001<.00139
OVIFFO1 →-0.731-0.374<.001<.00138
OVDOCK8 →-0.964-0.405<.001<.00138
COADC7 →-1.817-0.555<.001<.00138
OVPDE1B →-0.746-0.357<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 20,966 associations by consensus.

LRPPRC vs DCN — OV

Per-sample scatter of LRPPRC vs DCN in OV (Pearson r = -0.43).

Explore this scatter interactively →

Exploration