LRCH4

mutation — cross-omics
Cross-omicsMUTATION → DRUGCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, LRCH4 mutation is significantly associated with the drug of many other genes, with 40 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible LRCH4-associated genes across cancer lineages are Staurosporine, CCT007093, and Niraparib. Each is linked with LRCH4 in more than 1 cancer types. Because this analysis shows association rather than direction, both LRCH4-to-partner and partner-to-LRCH4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Staurosporine grouped by LRCH4-low versus LRCH4-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LRCH4→partner) and Y-score (partner→LRCH4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEStaurosporine →+0.466+2.868.037.02222
LARGE_INTESTINECCT007093 →+0.302+2.649.043.04631
LARGE_INTESTINENiraparib →+0.376+2.868.025.02231
LARGE_INTESTINEFulvestrant →+0.344+2.649.038.04631
LARGE_INTESTINELuminespib →+0.665+2.868.020.02231
LARGE_INTESTINEAZD5153 →+0.584+2.871.013.02131
Each partner links to its Q-omics profile. Showing the 6 strongest of 40 associations by consensus.

Staurosporine by LRCH4 expression — LARGE_INTESTINE

Box plot of Staurosporine in LRCH4-low vs LRCH4-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration