LPCAT2BP

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LPCAT2BP RNA expression is significantly associated with the protein abundance of many other proteins, with 3,551 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LPCAT2BP-associated proteins across cancer lineages are CHD4_T1653, KCNMA1, and SLC12A6_S1032. Each is linked with LPCAT2BP in more than 2 cancer types. Because this analysis shows association rather than direction, both LPCAT2BP-to-partner and partner-to-LPCAT2BP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LPCAT2BP versus CHD4_T1653 in PDAC, with a Pearson correlation of -0.23.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LPCAT2BP→partner) and Y-score (partner→LPCAT2BP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACCHD4_T1653 →-0.292-0.029.002<.00133
GBMKCNMA1 →+0.468+0.115<.001<.00132
GBMSLC12A6_S1032 →+0.538+0.108<.001<.00132
GBMATP6V0D1 →+0.365+0.088.008.00332
LUADCDV3_S30 →-0.388-0.027.006.00632
CCRCCCOG5 →-0.178-0.024.001.00632
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,551 associations by consensus.

LPCAT2BP vs CHD4_T1653 — PDAC

Per-sample scatter of LPCAT2BP vs CHD4_T1653 in PDAC (Pearson r = -0.23).

Explore this scatter interactively →

Exploration