Across TCGA patient cohorts, LMX1A-AS2 RNA expression is significantly associated with the RNA expression of many other genes, with 7,276 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible LMX1A-AS2-associated genes across cancer lineages are LMX1A, SLC17A6, and MIR483. Each is linked with LMX1A-AS2 in more than 16 cancer types. Because this analysis shows association rather than direction, both LMX1A-AS2-to-partner and partner-to-LMX1A-AS2 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LMX1A-AS2→partner) and Y-score (partner→LMX1A-AS2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PCPG	LMX1A →	+2.328	+0.056	<.001	<.001	3	17
TGCT	SLC17A6 →	+0.609	+0.181	<.001	.008	1	11
UCS	MIR483 →	+2.372	+0.144	<.001	.003	3	7
SKCM	KRTAP8-1 →	+0.731	+0.042	<.001	<.001	3	7
PCPG	WSPAR →	+0.617	+0.048	<.001	<.001	3	6
KIRC	SMAD9-IT1 →	+0.680	+0.011	<.001	.002	2	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,276 associations by consensus.

Exploration

LMX1A-AS2 survival (RNA) · tumor vs normal (RNA) · all LMX1A-AS2 data types