LMTK3

Across TCGA patient cohorts, LMTK3 protein abundance is significantly associated with the RNA expression of many other genes, with 7,453 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LMTK3-associated genes across cancer lineages are MEIS2, LCP1, and CA7. Each is linked with LMTK3 in more than 1 cancer types. Because this analysis shows association rather than direction, both LMTK3-to-partner and partner-to-LMTK3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LMTK3 versus MEIS2 in GBM, with a Pearson correlation of 0.28.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LMTK3→partner) and Y-score (partner→LMTK3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	MEIS2 →	+0.855	+0.376	<.001	<.001	3	2
GBM	LCP1 →	-0.796	-0.313	<.001	.004	3	2
GBM	CA7 →	+0.850	+0.556	<.001	<.001	3	2
GBM	CARD9 →	-0.479	-0.317	<.001	<.001	3	2
GBM	NOL4L →	+0.471	+0.355	<.001	.001	3	2
GBM	C9orf129 →	+0.552	+0.303	<.001	<.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,453 associations by consensus.

LMTK3 vs MEIS2 — GBM

Explore this scatter interactively →