LLCFC1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LLCFC1 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,849 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LLCFC1-associated proteins across cancer lineages are LAD1, LAD1_S177, and ICA1. Each is linked with LLCFC1 in more than 3 cancer types. Because this analysis shows association rather than direction, both LLCFC1-to-partner and partner-to-LLCFC1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LLCFC1 versus LAD1 in LSCC, with a Pearson correlation of -0.37.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LLCFC1→partner) and Y-score (partner→LLCFC1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCLAD1 →-0.697-0.381<.001.00334
LSCCLAD1_S177 →-0.896-0.334.001.00434
BRCAICA1 →+0.403+0.593.003<.00133
GBMRPL7A →-0.305-0.573.001.00533
GBMRPS3 →-0.226-0.718<.001<.00133
BRCATBC1D24 →+0.457+0.382<.001.00433
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,849 associations by consensus.

LLCFC1 vs LAD1 — LSCC

Per-sample scatter of LLCFC1 vs LAD1 in LSCC (Pearson r = -0.37).

Explore this scatter interactively →

Exploration