Across TCGA patient cohorts, LIPE-AS1 RNA expression is significantly associated with the RNA expression of many other genes, with 18,224 significant associations in total. THYM shows the largest number of these associations.

The most reproducible LIPE-AS1-associated genes across cancer lineages are CNFN, LAMTOR4, and REX1BD. Each is linked with LIPE-AS1 in more than 31 cancer types. Because this analysis shows association rather than direction, both LIPE-AS1-to-partner and partner-to-LIPE-AS1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LIPE-AS1→partner) and Y-score (partner→LIPE-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	CNFN →	+3.097	+0.443	<.001	<.001	3	32
DLBC	LAMTOR4 →	+1.269	+0.772	<.001	<.001	3	30
DLBC	REX1BD →	+0.977	+0.784	<.001	<.001	3	30
THYM	POLR2I →	+0.851	+0.628	<.001	<.001	3	29
UCS	ZNF428 →	+1.129	+0.874	<.001	<.001	3	29
ACC	C19orf73 →	+0.847	+0.721	<.001	<.001	2	29

Each partner links to its Q-omics profile. Showing the 6 strongest of 18,224 associations by consensus.

Exploration

LIPE-AS1 survival (RNA) · tumor vs normal (RNA) · all LIPE-AS1 data types