LINC02842

Across TCGA patient cohorts, LINC02842 RNA expression is significantly associated with the protein abundance of many other proteins, with 6,043 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC02842-associated proteins across cancer lineages are PTPN6, RGS10, and SASH3. Each is linked with LINC02842 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC02842-to-partner and partner-to-LINC02842 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02842 versus PTPN6 in HNSC, with a Pearson correlation of 0.30.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02842→partner) and Y-score (partner→LINC02842) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	PTPN6 →	+0.540	+0.645	<.001	.001	3	5
CCRCC	RGS10 →	+0.318	+0.135	<.001	.005	3	4
HNSC	SASH3 →	+0.560	+0.490	<.001	.001	3	4
HNSC	ADA2 →	+0.543	+0.427	<.001	.005	3	4
HNSC	BTK →	+0.632	+0.685	<.001	<.001	3	4
HNSC	DOCK2 →	+0.648	+0.630	<.001	.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,043 associations by consensus.

LINC02842 vs PTPN6 — HNSC

Explore this scatter interactively →