LINC02728

Across TCGA patient cohorts, LINC02728 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,845 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC02728-associated proteins across cancer lineages are RSF1_S1359, SCAF1_S548, and JMJD1C_S943. Each is linked with LINC02728 in more than 3 cancer types. Because this analysis shows association rather than direction, both LINC02728-to-partner and partner-to-LINC02728 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02728 versus RSF1_S1359 in PDAC, with a Pearson correlation of 0.45.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02728→partner) and Y-score (partner→LINC02728) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PDAC	RSF1_S1359 →	+0.702	+0.268	<.001	<.001	3	4
PDAC	SCAF1_S548 →	+0.485	+0.220	<.001	<.001	3	4
PDAC	JMJD1C_S943 →	+0.776	+0.369	<.001	<.001	3	4
GBM	BCAS2 →	+0.261	+0.386	<.001	.001	3	4
HNSC	NARS2 →	+0.440	+0.503	.004	.001	3	4
HNSC	NELFE_S353 →	+0.632	+0.669	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,845 associations by consensus.

LINC02728 vs RSF1_S1359 — PDAC

Explore this scatter interactively →