LINC02563

Across TCGA patient cohorts, LINC02563 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,350 significant associations in total. COAD shows the largest number of these associations.

The most reproducible LINC02563-associated GO terms across cancer lineages are RNA 3'-end processing, Sulfur compound catabolic process, and Branched-chain amino acid transport. Each is linked with LINC02563 in more than 6 cancer types. Because this analysis shows association rather than direction, both LINC02563-to-partner and partner-to-LINC02563 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA 3'-end processing grouped by LINC02563-low versus LINC02563-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02563→partner) and Y-score (partner→LINC02563) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	RNA 3'-end processing →	+0.060	+0.258	<.001	.001	3	6
STAD	Sulfur compound catabolic process →	+0.055	+0.417	<.001	<.001	3	6
ESCA	Branched-chain amino acid transport →	+0.069	+0.501	<.001	.002	3	6
STAD	Bile acid metabolic process →	+0.035	+0.434	<.001	<.001	3	6
STAD	Mitochondrial RNA processing →	+0.052	+0.375	<.001	<.001	3	5
UCEC	Mesenchymal cell apoptotic process →	+0.061	+0.036	<.001	.004	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,350 associations by consensus.

RNA 3'-end processing by LINC02563 expression — STAD

Explore this box plot interactively →