LINC02500

Across TCGA patient cohorts, LINC02500 RNA expression is significantly associated with the RNA expression of many other genes, with 8,647 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible LINC02500-associated genes across cancer lineages are SLC17A6, LINC02440, and LINC02567. Each is linked with LINC02500 in more than 11 cancer types. Because this analysis shows association rather than direction, both LINC02500-to-partner and partner-to-LINC02500 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02500 versus SLC17A6 in LGG, with a Pearson correlation of 0.56.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02500→partner) and Y-score (partner→LINC02500) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LGG	SLC17A6 →	+1.322	+0.193	<.001	<.001	3	12
BLCA	LINC02440 →	+0.730	+0.382	<.001	<.001	3	10
ESCA	LINC02567 →	+0.513	+0.125	<.001	<.001	3	10
TGCT	MIR124-2HG →	+1.207	+0.087	<.001	<.001	3	9
ESCA	LINC02338 →	+0.510	+0.065	<.001	.009	2	10
LGG	GABRA1 →	+2.779	+0.211	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,647 associations by consensus.

LINC02500 vs SLC17A6 — LGG

Explore this scatter interactively →