LINC02500

Across TCGA patient cohorts, LINC02500 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,042 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02500-associated GO terms across cancer lineages are Negative regulation of developmental growth, Developmental growth involved in morphogenesis, and Regulation of heart contraction. Each is linked with LINC02500 in more than 5 cancer types. Because this analysis shows association rather than direction, both LINC02500-to-partner and partner-to-LINC02500 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of developmental growth grouped by LINC02500-low versus LINC02500-high in TGCT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02500→partner) and Y-score (partner→LINC02500) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
TGCT	Negative regulation of developmental growth →	+0.058	+0.066	<.001	.001	3	6
TGCT	Developmental growth involved in morphogenesis →	+0.062	+0.098	<.001	.003	3	6
STAD	Regulation of heart contraction →	+0.045	+0.024	<.001	<.001	3	6
TGCT	Negative regulation of peptidyl-threonine phosphorylation →	+0.091	+0.065	<.001	.001	3	5
STAD	Action potential →	+0.037	+0.023	<.001	<.001	3	5
STAD	Peptide transport →	+0.052	+0.024	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,042 associations by consensus.

Negative regulation of developmental growth by LINC02500 expression — TGCT

Explore this box plot interactively →