LINC02477

Across TCGA patient cohorts, LINC02477 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,986 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible LINC02477-associated GO terms across cancer lineages are Methylation, Vesicle targeting, to, from or within Golgi, and Negative regulation of apoptotic signaling pathway. Each is linked with LINC02477 in more than 9 cancer types. Because this analysis shows association rather than direction, both LINC02477-to-partner and partner-to-LINC02477 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Methylation grouped by LINC02477-low versus LINC02477-high in TGCT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02477→partner) and Y-score (partner→LINC02477) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
TGCT	Methylation →	+0.021	+0.153	<.001	<.001	3	10
UCEC	Vesicle targeting, to, from or within Golgi →	+0.028	+0.073	<.001	<.001	3	10
KIRC	Negative regulation of apoptotic signaling pathway →	+0.031	+0.089	<.001	<.001	3	9
KIRC	Cellular response to steroid hormone stimulus →	+0.020	+0.049	<.001	<.001	3	9
CHOL	Mitochondrial transport →	+0.025	+0.490	.001	.003	2	10
KIRC	Negative regulation of mRNA processing →	+0.029	+0.069	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,986 associations by consensus.

Methylation by LINC02477 expression — TGCT

Explore this box plot interactively →