LINC02469

Across TCGA patient cohorts, LINC02469 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,553 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible LINC02469-associated proteins across cancer lineages are ZNF704_S77, DNAJC3, and SYNPO_S263. Each is linked with LINC02469 in more than 2 cancer types. Because this analysis shows association rather than direction, both LINC02469-to-partner and partner-to-LINC02469 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02469 versus ZNF704_S77 in LUAD, with a Pearson correlation of 0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02469→partner) and Y-score (partner→LINC02469) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	ZNF704_S77 →	+0.754	+0.184	<.001	<.001	3	3
GBM	DNAJC3 →	-0.249	-0.109	.004	.009	3	3
PDAC	SYNPO_S263 →	+0.999	+0.129	.007	.009	3	3
CCRCC	PPM1F →	+0.257	+0.458	<.001	<.001	3	3
CCRCC	HPGDS →	+0.505	+0.495	.002	<.001	3	3
CCRCC	PLCL1 →	+0.358	+0.501	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,553 associations by consensus.

LINC02469 vs ZNF704_S77 — LUAD

Explore this scatter interactively →