LINC02458

Across TCGA patient cohorts, LINC02458 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,123 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02458-associated GO terms across cancer lineages are Positive regulation of cytoskeleton organization, Muscle cell migration, and Response to UV. Each is linked with LINC02458 in more than 18 cancer types. Because this analysis shows association rather than direction, both LINC02458-to-partner and partner-to-LINC02458 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of cytoskeleton organization grouped by LINC02458-low versus LINC02458-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02458→partner) and Y-score (partner→LINC02458) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Positive regulation of cytoskeleton organization →	+0.055	+0.131	<.001	<.001	3	19
STAD	Muscle cell migration →	+0.047	+0.060	<.001	<.001	3	19
STAD	Response to UV →	+0.062	+0.066	<.001	<.001	3	18
ESCA	Cellular response to UV →	+0.061	+0.107	.001	<.001	3	18
ESCA	Stress fiber assembly →	+0.066	+0.103	<.001	<.001	3	18
STAD	Endothelial cell migration →	+0.045	+0.060	<.001	<.001	3	18

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,123 associations by consensus.

Positive regulation of cytoskeleton organization by LINC02458 expression — ESCA

Explore this box plot interactively →