LINC02440

Across TCGA patient cohorts, LINC02440 RNA expression is significantly associated with the RNA expression of many other genes, with 7,818 significant associations in total. LGG shows the largest number of these associations.

The most reproducible LINC02440-associated genes across cancer lineages are RIT2, MMD2, and SLC17A6. Each is linked with LINC02440 in more than 14 cancer types. Because this analysis shows association rather than direction, both LINC02440-to-partner and partner-to-LINC02440 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02440 versus RIT2 in GBM, with a Pearson correlation of 0.55.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02440→partner) and Y-score (partner→LINC02440) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	RIT2 →	+1.786	+1.343	<.001	<.001	3	13
LGG	MMD2 →	+1.581	+1.366	<.001	<.001	3	13
GBM	SLC17A6 →	+1.060	+1.297	<.001	<.001	3	13
LUAD	SNAI1P1 →	+0.694	+0.281	<.001	<.001	3	13
KICH	MIR124-1HG →	+1.646	+0.042	<.001	<.001	1	15
LGG	MIR124-2HG →	+1.137	+1.415	<.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,818 associations by consensus.

LINC02440 vs RIT2 — GBM

Explore this scatter interactively →