LINC02430

Across TCGA patient cohorts, LINC02430 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,527 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC02430-associated proteins across cancer lineages are PFN1, PDIA3, and CBX2. Each is linked with LINC02430 in more than 2 cancer types. Because this analysis shows association rather than direction, both LINC02430-to-partner and partner-to-LINC02430 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02430 versus PFN1 in GBM, with a Pearson correlation of -0.37.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02430→partner) and Y-score (partner→LINC02430) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	PFN1 →	-0.208	-0.284	<.001	<.001	3	3
GBM	PDIA3 →	-0.305	-0.333	<.001	.001	3	3
CCRCC	CBX2 →	+0.687	+0.217	.009	.008	3	3
LUAD	DYNLL2 →	+0.423	+0.257	<.001	.001	3	3
LSCC	MYBL2_T266 →	+0.507	+0.306	.002	.002	3	2
HNSC	NADK2 →	+0.304	+0.639	.003	.009	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,527 associations by consensus.

LINC02430 vs PFN1 — GBM

Explore this scatter interactively →