LINC02417

Across TCGA patient cohorts, LINC02417 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,649 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible LINC02417-associated proteins across cancer lineages are ACTR2, LSP1_S130, and MTA1_S576. Each is linked with LINC02417 in more than 3 cancer types. Because this analysis shows association rather than direction, both LINC02417-to-partner and partner-to-LINC02417 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02417 versus ACTR2 in PDAC, with a Pearson correlation of -0.35.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02417→partner) and Y-score (partner→LINC02417) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PDAC	ACTR2 →	-0.179	-0.289	<.001	.009	3	4
PDAC	LSP1_S130 →	-0.819	-0.383	<.001	<.001	3	4
LSCC	MTA1_S576 →	+0.692	+0.540	<.001	<.001	3	3
LSCC	NONO →	+0.125	+0.394	.001	<.001	3	3
LSCC	OSTF1 →	-0.308	-0.731	<.001	<.001	3	3
LUAD	PAFAH1B3 →	+0.435	+0.805	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,649 associations by consensus.

LINC02417 vs ACTR2 — PDAC

Explore this scatter interactively →