LINC02411

Across TCGA patient cohorts, LINC02411 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,474 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC02411-associated GO terms across cancer lineages are Regulation of protein secretion, Chaperone-mediated protein folding, and Ceramide metabolic process. Each is linked with LINC02411 in more than 7 cancer types. Because this analysis shows association rather than direction, both LINC02411-to-partner and partner-to-LINC02411 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of protein secretion grouped by LINC02411-low versus LINC02411-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02411→partner) and Y-score (partner→LINC02411) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Regulation of protein secretion →	+0.042	+0.307	<.001	.001	3	8
UCEC	Chaperone-mediated protein folding →	+0.063	+0.022	<.001	<.001	3	8
ESCA	Ceramide metabolic process →	+0.051	+0.348	<.001	<.001	3	8
ESCA	Regulation of peptide transport →	+0.035	+0.398	<.001	<.001	3	8
UCEC	Telomerase holoenzyme complex assembly →	+0.053	+0.022	<.001	<.001	3	8
UCEC	Electron transport chain →	+0.060	+0.041	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,474 associations by consensus.

Regulation of protein secretion by LINC02411 expression — ESCA

Explore this box plot interactively →