LINC02354

Across TCGA patient cohorts, LINC02354 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,021 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02354-associated GO terms across cancer lineages are Canonical NF-kappaB signal transduction, Regulation of macroautophagy, and Interferon-beta production. Each is linked with LINC02354 in more than 18 cancer types. Because this analysis shows association rather than direction, both LINC02354-to-partner and partner-to-LINC02354 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Canonical NF-kappaB signal transduction grouped by LINC02354-low versus LINC02354-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02354→partner) and Y-score (partner→LINC02354) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Canonical NF-kappaB signal transduction →	+0.040	+0.076	<.001	<.001	3	19
STAD	Regulation of macroautophagy →	+0.073	+0.115	<.001	<.001	3	19
LAML	Interferon-beta production →	+0.050	+0.327	<.001	<.001	3	19
STAD	Regulation of protein deubiquitination →	+0.050	+0.095	<.001	<.001	3	18
STAD	Cellular response to oxygen levels →	+0.039	+0.081	<.001	<.001	3	18
STAD	Positive regulation of canonical NF-kappaB signal transduction →	+0.046	+0.077	<.001	<.001	3	18

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,021 associations by consensus.

Canonical NF-kappaB signal transduction by LINC02354 expression — STAD

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